
Field work at the Nunnock River site, Australia, 2001
Field work at the Tanana River site, Alaska, 2002
The rates, mechanisms,
and products of chemical weathering of minerals in silicate-dominated rocks
are of fundamental importance because chemical weathering is a key step
in formation of soils and sediments, and a determinant of water chemistry.
We began work on weathering by analysis of the chemistry and structural state of reaction products through characterization of the mineral-reaction product interface in weathered granite with atomic resolution (e.g., Banfield and Eggleton 1988). This work, like the vast majority of mineralogical and geochemical research on weathering of crustal rocks to date, focused on study of inorganic weathering reactions.
It is clear that microorganisms impact mineral weathering in numerous ways. In addition to chemical (release of acids, organic complexing agents, etc.) and enzymatic (catalysis of redox reactions) effects, organisms contribute to physical weathering processes.
Our goal is to understand the nature of microbe-mineral interactions that lead to geochemical chanage at the level of pathways and genes. The first step was to identify the form of the interaction, and the range in magnitude of the various effects.
Thus, ten years ago, we began to study of microbe-mineral interactions by characterization of the intact interface between lichens (symbioses of fungi plus algae and bacteria) and minerals at high resolution (down to the atomic scale; e.g., Barker and Banfield, 1996). Subsequently, laboratory studies were used to quantify the processes inferred to be important. For example, high-resolution imaging and chemical analyses indicate intimate association between mineral surfaces, extracellular polymers, and clays. Dissolution experiments were conducted to measure the pH-dependent effect of model polysaccharides on mineral dissolution rates and secondary products (Welch et al. 1999, Welch et al., 2001). Effects range from suppression of dissolution to up to a thousand times increase in dissolution rates for feldspars. We have also measured the effects of dissolved organic acids and quantified pH gradients in proximity to cell surfaces (Barker et al. 1998) so that experimental rates can be applied to natural systems.
Recently, we have begun to characterize the inorganic and microbial contributions to granite weathering and soil formation. We are applying molecular biological techniques used in the sulfide AMD geomicrobiology work to identify organisms within microbial communities in the soil and saprolite (weathered granite with intact granitic texture). We will also continue to isolate organisms and conduct experiments with these to test hypotheses about the impact of microbes in the profile on weathering reactions and, conversely, mineralogical and geochemical controls on microbial populations.
An important new direction in our work on biogeochemical weathering of granite is the formation of a new collaboration with geomorphologists, including Prof. Bill Dietrich, UC Berkelely. Our goal is to link their larger scale studies of landscape evolution involving transport models and cosmogenic nuclide dating with geochemical studies of the profile and process occurring within it to quantitatively evaluate the contributions of dissolution in the saprolite and soil to landscape lowering, and to evaluate how these vary with landscape position and curvature.
Left, the soil-saprolite interface in the trench at Nunnock River, and right, Lis Grove, Ph.D. student
To date, most of our work has been carried out in southern New South Wales, Australia. The first site, referred to as the Bemboka site, located at the top of the escarpment, has been studied by us for many years. We have characterized the mineralogy, geochemistry, and total microbial population size. The second site, referred to as the Nunnock River site, was studied in terms of curvature, soil thickness, and landscape lowering rate by Heimsath, Dietrich, and colleagues. It is 3 km from the Bemboka site, and below the top of the escarpment. Recently, we began a detailed geochemical, mineralogical, and microbiological characterization effort at the Nunnock River site so that both data sets were available from one site. This involved an extensive sampling effort along the ridge. In addition, we dug a trench through the soil and saprolite to provide access to the saprolite at depth and to improve our understanding of the soil-saprolite sequence across the ridge (see photos above). Future plans include more extensive surveying to determine the form of the rock-saprolite interface.
Jenn Macalady sampling in the trench at the Nunnock River site
Dissolution of insoluble phosphate minerals by microorganisms
We have focused on the impact of microorganisms on the dissolution of phosphate minerals, including apatite and secondary phosphate minerals that are commonly encountered in saprolite and soil. This is an important problem because bioavailability of phosphorus limits the productivity of many soils, and "insoluble" secondary phosphates are an important reservoir for phosphate in some cases. The solubilization of these minerals was demonstrated in the field. (Taunton et al. 2000). Ongoing experiments are revealing the details of the mechanisms by which microbes access phosphate bound in these phases.
The Tanana River site, south of Fairbanks, Alaska
The phosphate mineral project recently expanded to a new
site in Alaska, as part of a genomic-based collaborative study led by Prof.
Jo Handelsman, UW Madison. The sites for this work are located on
the Tanana River, south of Fairbanks. Samples were collected from
three localities previously included in LTER studies. Prior work
by the LTER team established that the forrests colonizing the river banks
are phosphate-limited. The objectives of this project are to determine
the form of the inorganic phosphate minerals in the soils and then use
molecular biological methods to discover possible genes involved in phosphate
solubilization by microbes. Gene expression products will be tested
to determine their effectiveness.
Banfield, J. F. and Eggleton, R. A. (1988) A transmission electron microscope study of biotite weathering. Clays and Clay Minerals, 36, 47-60.
Barker, W.W. and Banfield, J.F. (1996) Biologically-versus inorganically-mediated weathering reactions: relationships between minerals and extracellular microbial polymers in lithobiontic communities, Chemical Geology, Vol. 132, pp 55-69.
Barker, W.W., Welch, S.A., and Banfield, J.F.(1998) Experimental observations on the effects of microorganisms on silicate weathering. American Mineralogist, 83, 1551-1563.
Taunton, A.E., Welch, S.A., and Banfield (2000) J.F Microbial controls on phosphate and lanthanide distributions during granite weathering. Chemical Geology, invited paper, 169, 371-382.
Welch, S.A., Barker, W.W., and Banfield, J.F. (1999) Microbial extracellular polysaccharides and plagioclase dissolution. Geochim. Cosmochim. Acta, 63, 1405-1420.
Welch, S.A., Taunton, A.E., and Banfield, J.F. (2001) Effect of microorganisms and microbial metabolites on apatite dissolution. Geomicrobiology Journal, in press.